troutpy.pp.compute_extracellular_counts

troutpy.pp.compute_extracellular_counts(data_extracell)

Compute observed, expected, and fold ratio for extracellular transcript counts.

Parameters:

data_extracell (pandas.DataFrame) – Data with extracellular transcripts.

Returns:

pandas.DataFrame Dataframe with observed, expected counts, fold ratios, and gene categories.