troutpy.pl.sorted_heatmap

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troutpy.pl.sorted_heatmap#

troutpy.pl.sorted_heatmap(celltype_by_feature, output_path='', filename='Heatmap_target_cells_by_gene', format='pdf', cmap='viridis', vmax=None, save=False, figsize=(10, 10))#

Plots the heatmap of target cells by gene.

Parameters:

  • celltype_by_feature (pandas.DataFrame) – DataFrame showing the fraction of each feature by cell type.

  • outpath_dummy (str) – Path to save the output plots.

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