troutpy.pl.histogram

Contents

troutpy.pl.histogram#

troutpy.pl.histogram(sdata, x, hue=None, layer='transcripts', group_key=None, figures_path='', save=True, title=None, custom_plot_filename=None, palette='tab10', bins=30, kde=False)#

Plots histograms of a numeric variable with optional grouping and faceting.

Parameters:

  • sdata (spatialdata.SpatialData) – The input spatial data object.

  • x (str) – The name of the numeric column to plot on the x-axis.

  • hue (str) – The column name used for color grouping (optional).

  • layer (str) – The layer in sdata.points to extract data from (default is “transcripts”).

  • group_key (str) – If provided, creates subplots by the unique values of this column.

  • figures_path (str) – Path to save the plot if save is True.

  • save (bool) – Whether to save the figure as a PDF.

  • title (str) – Overall title for the plot.

  • custom_plot_filename (str) – Custom filename to use when saving the figure.

  • palette (str) – Color palette name for seaborn (default is “tab10”).

  • bins (int) – Number of histogram bins (default is 30).

  • kde (bool) – Whether to overlay a kernel density estimate (default is False).

Returns:

None

Contents