troutpy.pl.genes_over_noise

troutpy.pl.genes_over_noise#

troutpy.pl.genes_over_noise(sdata, scores_by_genes, layer='extracellular_transcripts', output_path='', save=True, format='pdf')#

Function that plots log fold change per gene over noise using a boxplot.

Parameters:

  • data_quantified – DataFrame containing the extracellular transcript data, including feature names and codeword categories.

  • scores_by_genes – DataFrame containing gene scores with feature names and log fold ratios.

  • output_path (str (default: '')) – Path to save the figure.

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